Basic Information
Locus ID:
nbisL1-mrna-29131
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 41267817 | 41272534 | - | nbisL1-mrna-29131 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 113,101.54 Da | 33.27 | 100.53 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 346 | 406 | 2.2E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 275 | 334 | 6.5E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 83 | 142 | 3.3E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 718 | 987 | 2.0E-47 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 78 | 0.0024 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 202 | 262 | 7.6E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 514 | 571 | 1.3E-6 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 86 | 431 | 6.83E-70 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 387 | 624 | 7.03E-49 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 718 | 990 | 1.15E-72 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 321 | 637 | 1.4E-87 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 691 | 793 | 9.2E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 794 | 1001 | 8.6E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 194 | 2.2E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 195 | 316 | 2.5E-33 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 297 | 321 | 110.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 715 | 994 | 6.0E-34 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 249 | 273 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 201 | 225 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 441 | 465 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 345 | 369 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 129 | 153 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 560 | 583 | 220.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 715 | 994 | 38.152626 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 841 | 853 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 721 | 744 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 441 | 454 | 9.6E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 300 | 313 | 9.6E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_017973822.1 | PREDICTED: leucine-rich repeat receptor-like protein kinase TDR [Theobroma cacao] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A061G0D5 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology