Basic Information
Locus ID:
nbisL1-mrna-29102
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 41075819 | 41079158 | - | nbisL1-mrna-29102 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.80 | 74,038.73 Da | 32.74 | 96.67 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 410 | 669 | 7.88474E-90 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 63 | 8.0E-9 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 408 | 669 | 2.4E-38 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 23 | 232 | 5.53E-42 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 382 | 669 | 2.95E-56 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 483 | 675 | 2.6E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 172 | 5.3E-45 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 173 | 242 | 3.6E-14 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 378 | 482 | 2.9E-25 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 404 | 676 | 28.287094 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 410 | 432 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G51560.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011041704.1 | PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Populus euphratica] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2WYH8 | Protein kinase domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_025440 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology