Basic Information
Locus ID:
nbisL1-mrna-28966
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
BTB POZ and TAZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 40026230 | 40028226 | - | nbisL1-mrna-28966 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.97 | 38,813.72 Da | 56.02 | 92.03 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02135 | TAZ zinc finger | 204 | 289 | 1.2E-12 | IPR000197 |
| Pfam | PF00651 | BTB/POZ domain | 20 | 116 | 2.0E-8 | IPR000210 |
| SUPERFAMILY | SSF57933 | TAZ domain | 194 | 294 | 3.14E-19 | IPR035898 |
| SUPERFAMILY | SSF54695 | POZ domain | 20 | 147 | 1.07E-12 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 12 | 118 | 8.1E-15 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 120 | 190 | 5.2E-12 | - |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 191 | 317 | 4.2E-21 | IPR035898 |
| SMART | SM00551 | TAZ_2 | 196 | 290 | 1.4E-21 | IPR000197 |
| SMART | SM00225 | BTB_4 | 20 | 120 | 1.8E-9 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 20 | 88 | 12.122698 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63160.1 | BTB and TAZ domain protein 1. BTB and TAZ domain protein. Short-lived nuclear-cytoplasmic protein targeted for degradation by the 26S proteosome pathway. Acts redundantly with BT2 and BT3 during female gametophyte development. | 0 |
| RefSeq | XP_002511276.1 | BTB/POZ and TAZ domain-containing protein 1 [Ricinus communis] | 0 |
| Q9FMK7 | BTB/POZ and TAZ domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8CHF1 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology