Basic Information
Locus ID:
nbisL1-mrna-28885
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
serine threonine-protein kinase HT1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 39383381 | 39388548 | + | nbisL1-mrna-28885 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.44 | 40,509.54 Da | 46.74 | 79.80 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 64 | 311 | 1.52762E-120 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 59 | 311 | 1.2E-66 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 46 | 311 | 1.16E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 140 | 328 | 8.4E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 47 | 138 | 4.2E-20 | - |
| SMART | SM00220 | serkin_6 | 57 | 315 | 4.9E-62 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 57 | 315 | 42.788578 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 179 | 191 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 219 | 229 | 1.7E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 173 | 191 | 1.7E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 238 | 260 | 1.7E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 135 | 148 | 1.7E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 282 | 304 | 1.7E-19 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G62400.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_002511408.1 | serine/threonine/tyrosine-protein kinase HT1 [Ricinus communis] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | B9RB33 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology