Basic Information
Locus ID:
nbisL1-mrna-2877
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Receptor protein kinase-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| unplaced_scaffold266 | 28463 | 28816 | + | nbisL1-mrna-2877 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.75 | 12,858.50 Da | 28.93 | 120.59 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 74 | 98 | 0.69 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 1 | 117 | 2.24E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 118 | 4.9E-37 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 52 | 74 | 7.33462 | IPR001611 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_017985404.1 | PREDICTED: MDIS1-interacting receptor like kinase 2-like, partial [Theobroma cacao] | 0 |
| TrEMBL | A0A2G5CS36 | Protein kinase domain-containing protein (Fragment) OS=Aquilegia coerulea OX=218851 GN=AQUCO_03900112v1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah036118 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g209520 |
| Apiaceae | Apium graveolens | 1 | Ag11G03669 |
| Brassicaceae | Brassica nigra | 1 | BniB04g047740.2N |
| Casuarinaceae | Casuarina glauca | 1 | Cgl09G0774 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00013418 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_1BG0055280 |
| Poaceae | Oryza coarctata | 1 | Oco03G010770 |
| Poaceae | Oryza sativa | 1 | LOC_Os06g13330.1 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG005730, gene_TRIDC6AG044300 ... |
| Poaceae | Triticum aestivum | 1 | TraesCS5D02G077200.2 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-7939 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-2877 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-7737, nbisL1-mrna-9073 |
| Salicaceae | Populus euphratica | 1 | populus_peu32284 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_5484 |
| Zosteraceae | Zostera marina | 1 | Zosma03g29380.v3.1 |