Basic Information
Locus ID:
nbisL1-mrna-28679
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 37668935 | 37672583 | - | nbisL1-mrna-28679 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.85 | 72,154.58 Da | 41.22 | 99.40 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 378 | 641 | 2.42378E-86 | - |
| Pfam | PF00069 | Protein kinase domain | 375 | 635 | 2.6E-39 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 67 | 1.0E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 84 | 130 | 1.1E-6 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 376 | 643 | 2.49E-60 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 215 | 9.35E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 186 | 1.1E-38 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 447 | 654 | 2.1E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 187 | 234 | 1.8E-5 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 344 | 446 | 9.0E-22 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 168 | 190 | 7.234511 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 372 | 641 | 33.502541 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 378 | 400 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 643 | 666 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_021647181.1 | probable inactive receptor kinase RLK902 [Hevea brasiliensis] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2L9T5 | Uncharacterized protein MANES_06G003700 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology