Basic Information
Locus ID:
nbisL1-mrna-28426
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 35457816 | 35458691 | + | nbisL1-mrna-28426 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 20,163.79 Da | 48.32 | 93.58 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 59 | 124 | 6.2E-8 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 68 | 130 | 2.82E-12 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 48 | 175 | 9.2E-16 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 179 | 8.796309 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57750.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_044471822.1 | - | 0 |
| Q8LGB6 | Non-functional pseudokinase ZED1 OS=Arabidopsis thaliana OX=3702 GN=ZED1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2K7A8 | Non-functional pseudokinase ZED1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Plumbaginaceae | Limonium bicolor | 1 | Lb2G14398 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-28426 |