Basic Information
Locus ID:
nbisL1-mrna-27948
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 29806615 | 29813446 | + | nbisL1-mrna-27948 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.12 | 79,190.52 Da | 43.83 | 67.50 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14016 | STKc_CK1 | 149 | 425 | 2.65926E-135 | - |
| Pfam | PF00069 | Protein kinase domain | 149 | 437 | 1.2E-15 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 149 | 430 | 2.16E-60 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 116 | 477 | 2.8E-84 | - |
| SMART | SM00220 | serkin_6 | 149 | 447 | 1.1E-11 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 149 | 451 | 22.506287 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 276 | 288 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 155 | 188 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 86 | 115 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 115 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25760.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_021628151.1 | casein kinase 1-like protein HD16 isoform X1 [Manihot esculenta] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9UY01 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_11G034400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology