Basic Information
Locus ID:
nbisL1-mrna-27909
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 29382653 | 29386968 | + | nbisL1-mrna-27909 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.26 | 62,980.77 Da | 41.36 | 96.54 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 16 | 53 | 5.4E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 165 | 318 | 2.62E-11 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 14 | 74 | 2.75E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 56 | 2.0E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 157 | 405 | 3.5E-12 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 14 | 62 | 8.649649 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G69630.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_006427014.1 | F-box/LRR-repeat protein At4g14103 isoform X1 [Citrus clementina] | 0 |
| Q9FWZ1 | F-box/LRR-repeat protein 13 OS=Arabidopsis thaliana OX=3702 GN=FBL13 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2LVS2 | F-box domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology