Basic Information
Locus ID:
nbisL1-mrna-27907
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Rwd domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 29370231 | 29372828 | + | nbisL1-mrna-27907 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.49 | 35,214.93 Da | 45.12 | 101.96 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 11 | 47 | 1.1E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 52 | 1.7E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 146 | 300 | 3.4E-10 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 50 | 1.9E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 133 | 301 | 5.3E-9 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_006426980.1 | - | 0 |
| TrEMBL | A0A2P2LVU6 | F-box domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology