Basic Information
Locus ID:
nbisL1-mrna-27905
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 29361775 | 29363768 | + | nbisL1-mrna-27905 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 61,822.93 Da | 49.97 | 97.28 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 59 | 1.44E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 145 | 328 | 7.06E-14 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 3 | 50 | 1.6E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 111 | 348 | 7.4E-12 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_006427013.1 | F-box/LRR-repeat protein At4g14103 isoform X2 [Citrus clementina] | 0 |
| TrEMBL | A0A2P2LVS2 | F-box domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology