Basic Information
Locus ID:
nbisL1-mrna-27851
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 28873870 | 28875318 | + | nbisL1-mrna-27851 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 39,396.38 Da | 39.96 | 73.19 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 167 | 201 | 3.3E-9 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 120 | 152 | 2.9E-4 | IPR006652 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 48 | 7.33E-5 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 79 | 337 | 3.92E-37 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 20 | 345 | 1.6E-35 | IPR015915 |
| SMART | SM00612 | kelc_smart | 117 | 166 | 0.77 | IPR006652 |
| SMART | SM00612 | kelc_smart | 168 | 215 | 1.3E-6 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15670.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_012073304.2 | - | 0 |
| Q9LMR5 | F-box/kelch-repeat protein At1g15670 OS=Arabidopsis thaliana OX=3702 GN=At1g15670 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T2ZUE6 | F-box domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_002192 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology