Basic Information
Locus ID:
nbisL1-mrna-27817
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 28428941 | 28430519 | + | nbisL1-mrna-27817 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.99 | 45,318.27 Da | 45.47 | 103.33 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52058 | L domain-like | 46 | 193 | 2.01E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 211 | 6.9E-6 | IPR032675 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_18_RagTag.296, evm.TU.Scaffold_18_RagTag.614 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-27817 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-14567 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000023l.34 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-10492, nbisL1-mrna-24048 |