Basic Information
Locus ID:
nbisL1-mrna-27702
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
F-box FBD LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 27112417 | 27116382 | + | nbisL1-mrna-27702 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 56,501.26 Da | 48.67 | 92.91 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 19 | 56 | 7.2E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 16 | 113 | 1.7E-13 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 81 | 272 | 3.34E-8 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 4 | 57 | 1.1E-9 | - |
| SMART | SM00256 | fbox_2 | 23 | 64 | 0.0058 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 17 | 52 | 9.68293 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13570.2 | - | 0 |
| RefSeq | XP_035547747.1 | F-box/LRR-repeat protein At3g03360-like [Juglans regia] | 0 |
| Q8GXW6 | F-box/LRR-repeat protein At3g58930 OS=Arabidopsis thaliana OX=3702 GN=At3g58930 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6P9EYU6 | F-box/LRR-repeat protein At3g03360-like OS=Juglans regia OX=51240 GN=LOC109018596 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology