Basic Information
Locus ID:
nbisL1-mrna-2764
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002177F_pilon | 5248182 | 5256808 | + | nbisL1-mrna-2764 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 189,435.77 Da | 50.50 | 69.15 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1417 | 1680 | 1.9862E-147 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 350 | 618 | 4.68992E-119 | - |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 370 | 613 | 1.4E-30 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1456 | 1622 | 1.9E-34 | IPR002498 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1410 | 1680 | 3.27E-81 | - |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 4 | 70 | 6.24E-5 | IPR011011 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 416 | 584 | 3.66E-36 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1539 | 1681 | 5.3E-42 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 415 | 584 | 7.7E-48 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1386 | 1537 | 1.6E-36 | IPR027484 |
| SMART | SM00330 | PIPK_2 | 1392 | 1681 | 2.2E-114 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1360 | 1680 | 59.707195 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 3 | 68 | 9.017294 | IPR017455 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 330 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1340 | 1362 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1333 | 1362 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 79 | 101 | - | - |
| Coils | Coil | Coil | 958 | 1006 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_021647628.1 | LOW QUALITY PROTEIN: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Hevea brasiliensis] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2MG65 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology