Basic Information
Locus ID:
nbisL1-mrna-27622
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
F-box FBD LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 26397292 | 26399420 | + | nbisL1-mrna-27622 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 54,966.57 Da | 49.16 | 96.05 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 6 | 43 | 6.9E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 55 | 9.94E-13 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 67 | 257 | 2.94E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 3 | 259 | 1.2E-9 | IPR032675 |
| SMART | SM00256 | fbox_2 | 10 | 51 | 0.0058 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 4 | 58 | 10.159829 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G58930.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_035547747.1 | F-box/LRR-repeat protein At3g03360-like [Juglans regia] | 0 |
| Q8GXW6 | F-box/LRR-repeat protein At3g58930 OS=Arabidopsis thaliana OX=3702 GN=At3g58930 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6P9EYU6 | F-box/LRR-repeat protein At3g03360-like OS=Juglans regia OX=51240 GN=LOC109018596 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology