Basic Information
Locus ID:
nbisL1-mrna-27412
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 24687355 | 24691725 | - | nbisL1-mrna-27412 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 72,452.18 Da | 40.65 | 93.66 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 374 | 631 | 9.8E-23 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 97 | 156 | 2.6E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 70 | 1.5E-10 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 170 | 2.72E-23 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 356 | 631 | 2.49E-43 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 208 | 6.3E-35 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 454 | 638 | 2.7E-31 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 348 | 453 | 4.7E-17 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 371 | 634 | 20.654734 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 181 | 219 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 230 | 249 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 232 | 249 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40270.2 | Protein kinase family protein. | 0 |
| RefSeq | XP_011001758.1 | PREDICTED: inactive receptor-like serine/threonine-protein kinase At2g40270 isoform X2 [Populus euphratica] | 0 |
| Q9SIZ4 | Inactive receptor-like serine/threonine-protein kinase At2g40270 OS=Arabidopsis thaliana OX=3702 GN=At2g40270 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8T2XVI2 | Protein kinase domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_019547 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology