Basic Information
Locus ID:
nbisL1-mrna-27368
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 24335724 | 24338371 | - | nbisL1-mrna-27368 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.43 | 31,822.75 Da | 72.88 | 61.01 | -0.91 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 212 | 241 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 286 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 169 | 247 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 110 | 140 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 111 | 132 | - | - |
| Coils | Coil | Coil | 186 | 207 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28890.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_052305128.1 | - | 0 |
| Q5XF85 | E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana OX=3702 GN=ATL42 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7J7DAG8 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology