Basic Information
Locus ID:
nbisL1-mrna-2716
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Short Name:
ATMRK1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 24120274 | 24124230 | + | nbisL1-mrna-2716 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 37,967.29 Da | 28.05 | 87.52 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 42 | 311 | 3.78689E-111 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 37 | 311 | 3.4E-59 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 19 | 311 | 9.84E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 24 | 118 | 2.0E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 140 | 323 | 5.1E-59 | - |
| SMART | SM00220 | serkin_6 | 36 | 317 | 4.5E-59 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 126 | 323 | 1.9E-45 | - |
| PIRSF | PIRSF000654 | ILK | 15 | 118 | 4.6E-8 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 36 | 317 | 39.834572 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 181 | 193 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 285 | 307 | 2.2E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 175 | 193 | 2.2E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 137 | 150 | 2.2E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 241 | 263 | 2.2E-16 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22750.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_017623973.1 | PREDICTED: serine/threonine-protein kinase STY8-like [Gossypium arboreum] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B6VPV7 | Serine/threonine-protein kinase HT1-like OS=Gossypium australe OX=47621 GN=EPI10_016811 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology