Basic Information
Locus ID:
nbisL1-mrna-26944
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 20490258 | 20494370 | + | nbisL1-mrna-26944 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 62,840.97 Da | 40.66 | 91.49 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 246 | 517 | 3.2E-36 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 2 | 33 | 2.3E-9 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 5 | 147 | 3.79E-29 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 230 | 539 | 5.74E-69 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 321 | 538 | 4.6E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 214 | 320 | 1.8E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 155 | 1.1E-42 | IPR032675 |
| SMART | SM00220 | serkin_6 | 245 | 519 | 2.9E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 245 | 529 | 29.658091 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 251 | 273 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 349 | 361 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 0 |
| RefSeq | XP_021292632.1 | protein NSP-INTERACTING KINASE 3 [Herrania umbratica] | 0 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2MDC2 | Uncharacterized protein MANES_12G025900 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology