Basic Information
Locus ID:
nbisL1-mrna-26836
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Protein kinase 2B, chloroplastic-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 19483438 | 19484389 | - | nbisL1-mrna-26836 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.60 | 21,239.09 Da | 36.66 | 96.58 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 2 | 103 | 3.2E-23 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 184 | 4.05E-41 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 32 | 2.9E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 113 | 189 | 1.5E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 33 | 112 | 2.2E-24 | - |
| SMART | SM00220 | serkin_6 | 1 | 185 | 3.4E-8 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 190 | 21.446238 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 75 | 87 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20530.2 | - | 0 |
| RefSeq | XP_021664881.1 | - | 0 |
| F4JEQ2 | Probable serine/threonine-protein kinase PBL23 OS=Arabidopsis thaliana OX=3702 GN=PBL23 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6R0L1 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-26836 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000001l.200 |