Basic Information
Locus ID:
nbisL1-mrna-2683
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Short Name:
CPK13
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 11031901 | 11036251 | + | nbisL1-mrna-2683 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 56,682.21 Da | 42.04 | 87.01 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 52 | 285 | 4.79311E-97 | - |
| Pfam | PF13499 | EF-hand domain pair | 332 | 393 | 1.5E-10 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 184 | 286 | 9.6E-27 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 55 | 163 | 1.7E-20 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 404 | 467 | 2.8E-13 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 315 | 493 | 1.72E-45 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 39 | 310 | 1.22E-60 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 170 | 292 | 9.5E-36 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 293 | 470 | 5.0E-54 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 44 | 166 | 4.1E-27 | - |
| SMART | SM00054 | efh_1 | 369 | 397 | 0.021 | IPR002048 |
| SMART | SM00054 | efh_1 | 405 | 433 | 0.0017 | IPR002048 |
| SMART | SM00054 | efh_1 | 333 | 361 | 4.3E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 441 | 469 | 2.2E-6 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 53 | 286 | 28.174021 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 437 | 472 | 14.122869 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 365 | 400 | 10.105932 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 401 | 436 | 14.039183 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 329 | 364 | 16.215025 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 450 | 462 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 342 | 354 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 59 | 82 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_021620700.1 | calcium-dependent protein kinase 13 [Manihot esculenta] | 0 |
| Q8W4I7 | Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana OX=3702 GN=CPK13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2LMZ4 | Calcium-dependent protein kinase 13 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology