Basic Information
Locus ID:
nbisL1-mrna-2676
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002177F_pilon | 4393455 | 4396667 | - | nbisL1-mrna-2676 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 69,623.51 Da | 38.00 | 83.53 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12087 | TM_EGFR-like | 384 | 421 | 0.00391976 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 2 | 29 | 0.0065 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 299 | 334 | 6.3E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 454 | 566 | 6.4E-10 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 13 | 271 | 2.38E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 453 | 588 | 5.64E-22 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 430 | 584 | 2.5E-28 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 293 | 2.6E-75 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 296 | 360 | 2.5E-7 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 356 | 387 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 612 | 644 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_021593830.1 | - | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2L8F0 | Receptor protein kinase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology