Basic Information
Locus ID:
nbisL1-mrna-26759
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 18686659 | 18693769 | + | nbisL1-mrna-26759 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 188,057.55 Da | 40.76 | 100.37 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 173 | 281 | 5.4E-17 | IPR002182 |
| Pfam | PF00931 | NB-ARC domain | 305 | 414 | 1.0E-12 | IPR002182 |
| SUPERFAMILY | SSF52047 | RNI-like | 1295 | 1605 | 1.88E-14 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 487 | 1097 | 3.49E-26 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 154 | 428 | 1.49E-39 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 1116 | 1335 | 2.12E-12 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1106 | 1348 | 4.4E-10 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 331 | 417 | 3.6E-16 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 678 | 897 | 3.2E-7 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 148 | 326 | 1.1E-25 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 902 | 1105 | 3.6E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1366 | 1621 | 1.6E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 485 | 677 | 9.0E-17 | IPR032675 |
| PRINTS | PR00364 | Disease resistance protein signature | 364 | 378 | 3.4E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 252 | 266 | 3.4E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 635 | 651 | 3.4E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 179 | 194 | 3.4E-19 | - |
| Coils | Coil | Coil | 679 | 699 | - | - |
| Coils | Coil | Coil | 35 | 55 | - | - |
| Coils | Coil | Coil | 70 | 97 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_052302598.1 | - | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2MMH8 | Putative disease resistance protein At4g27220 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology