HalophFGD

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Basic Information
Locus ID: nbisL1-mrna-26619
Species & Taxonomic ID: Carallia pectinifolia & 98586
Genome Assembly: GCA_037832335.1
Description: Serine threonine-protein kinase sepA-like
Maps and Mapping Data
Chromosome Start End Strand ID
chr11 16742486 16764855 + nbisL1-mrna-26619
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.82 156,382.45 Da 41.80 96.02 -0.25
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd06627 STKc_Cdc7_like 19 274 3.71894E-180 -
Pfam PF00069 Protein kinase domain 21 274 1.9E-72 IPR000719
SUPERFAMILY SSF48371 ARM repeat 1109 1388 1.02E-20 IPR016024
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 17 275 2.83E-91 IPR011009
SUPERFAMILY SSF48371 ARM repeat 586 1199 9.79E-20 IPR016024
Gene3D G3DSA:1.25.10.10 - 573 799 2.0E-16 IPR011989
Gene3D G3DSA:1.25.10.10 - 1098 1395 1.8E-19 IPR011989
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 17 309 2.7E-91 -
SMART SM00220 serkin_6 20 274 3.7E-100 IPR000719
SMART SM00185 arm_5 715 758 150.0 IPR000225
SMART SM00185 arm_5 1226 1265 320.0 IPR000225
SMART SM00185 arm_5 1139 1179 370.0 IPR000225
SMART SM00185 arm_5 615 655 3.9 IPR000225
SMART SM00185 arm_5 1180 1224 120.0 IPR000225
ProSiteProfiles PS50011 Protein kinase domain profile. 20 274 52.329029 IPR000719
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 140 152 - IPR008271
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 26 49 - IPR017441
PRINTS PR00109 Tyrosine kinase catalytic domain signature 134 152 3.1E-9 IPR001245
PRINTS PR00109 Tyrosine kinase catalytic domain signature 243 265 3.1E-9 IPR001245
PRINTS PR00109 Tyrosine kinase catalytic domain signature 96 109 3.1E-9 IPR001245
PRINTS PR00109 Tyrosine kinase catalytic domain signature 200 222 3.1E-9 IPR001245
Coils Coil Coil 912 932 - -
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G13530.1 mitogen-activated protein kinase kinase kinase 7. MAP3K epsilon protein kinase 1 is functionally redundant with MAP3Ke2. Required for pollen development but not essential. map3ke1;map3ke2 double-mutant pollen grains develop plasma membrane irregularities following pollen mitosis I. Localized primarily in the plasma membrane. Expressed in leaf trichomes, root columella cells and developing ovules. 0
RefSeq XP_002310082.4 MAP3K epsilon protein kinase 1 isoform X1 [Populus trichocarpa] 0
Swiss-Prot Q9LJD8 MAP3K epsilon protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=M3KE1 PE=1 SV=1 0
TrEMBL A0A2P2MTC6 MAP3K epsilon protein kinase 1-like isoform X2 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 3 jg5040, jg5041, jg9698
Aizoaceae Mesembryanthemum crystallinum 2 gene_20539, gene_20540
Amaranthaceae Atriplex hortensis 1 Ah038480
Amaranthaceae Beta vulgaris 2 BVRB_9g203210, BVRB_9g203220
Amaranthaceae Salicornia bigelovii 3 Sbi_jg14227, Sbi_jg14653, Sbi_jg53497
Amaranthaceae Salicornia europaea 1 Seu_jg10151
Amaranthaceae Suaeda aralocaspica 1 GOSA_00012551
Amaranthaceae Chenopodium album 3 gene:ENSEOMG00000017951, gene:ENSEOMG00000039769 ...
gene:ENSEOMG00000052351
Amaranthaceae Chenopodium quinoa 3 CQ.Regalona.r1.1BG0006910, CQ.Regalona.r1.9AG0001210 ...
CQ.Regalona.r1.9BG0021230
Anacardiaceae Pistacia vera 1 pistato.v30224700
Apiaceae Apium graveolens 4 Ag1G02139, Ag3G01840, Ag5G01792, AgUnG00778
Arecaceae Cocos nucifera 1 COCNU_02G008040
Arecaceae Phoenix dactylifera 1 gene-LOC103705698
Asparagaceae Asparagus officinalis 1 AsparagusV1_09.1659.V1.1
Asteraceae Flaveria trinervia 2 Ftri13G17763, Ftri3G19894
Brassicaceae Arabidopsis thaliana 2 AT3G07980.1, AT3G13530.1
Brassicaceae Eutrema salsugineum 2 Thhalv10019902m.g.v1.0, Thhalv10019926m.g.v1.0
Brassicaceae Schrenkiella parvula 2 Sp3g06890.v2.2, Sp3g11740.v2.2
Brassicaceae Brassica nigra 5 BniB01g051670.2N, BniB01g051690.2N, BniB03g023690.2N ...
BniB07g027120.2N, BniB07g055520.2N
Casuarinaceae Casuarina equisetifolia 1 Ceq07G0627
Casuarinaceae Casuarina glauca 2 Cgl07G0614, Cgl07G0623
Cymodoceaceae Cymodocea nodosa 1 gene.Cymno14g09340
Dunaliellaceae Dunaliella salina 10 Dusal.0047s00002.v1.0, Dusal.0049s00031.v1.0 ...
Dusal.0049s00033.v1.0, Dusal.0096s00032.v1.0, Dusal.0174s00020.v1.0, Dusal.0210s00004.v1.0, Dusal.0268s00003.v1.0, Dusal.0268s00004.v1.0, Dusal.0268s00006.v1.0, Dusal.0355s00013.v1.0
Hydrocharitaceae Thalassia testudinum 1 gene.Thate08g14080
Malvaceae Hibiscus hamabo Siebold & Zucc. 2 nbisL1-mrna-9393, nbisL1-mrna-9394
Nitrariaceae Nitraria sibirica 1 evm.TU.LG03.942
Plantaginaceae Plantago ovata 1 Pov_00019389
Plumbaginaceae Limonium bicolor 2 Lb7G34098, Lb7G34518
Poaceae Echinochloa crus-galli 2 AH09.2589, BH09.2813
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_4AG0300770, gene-QOZ80_4BG0331480
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.2HG0202060.1
Poaceae Lolium multiflorum 2 gene-QYE76_000054, gene-QYE76_046966
Poaceae Oryza coarctata 2 Oco07G018150, Oco08G017530
Poaceae Oryza sativa 1 LOC_Os04g56530.1
Poaceae Paspalum vaginatum 1 gene-BS78_06G268900
Poaceae Puccinellia tenuiflora 3 Pt_Chr0300488, Pt_Chr0300508, Pt_Chr0503147
Poaceae Sporobolus alterniflorus 5 Chr23G001840, Chr25G001450, Chr26G017460, Chr30G000320 ...
Chr30G001460
Poaceae Thinopyrum elongatum 2 Tel2E01G842500, Tel3E01G009200
Poaceae Triticum dicoccoides 2 gene_TRIDC2AG070140, gene_TRIDC2BG075830
Poaceae Triticum aestivum 3 TraesCS2A02G498000.3, TraesCS2B02G526200.3 ...
TraesCS2D02G498100.1
Poaceae Zea mays 4 Zm00001eb067530_P002, Zm00001eb134900_P001 ...
Zm00001eb339770_P001, Zm00001eb432730_P002
Poaceae Zoysia japonica 1 nbis-gene-6089
Poaceae Zoysia macrostachya 2 Zma_g20613, Zma_g22143
Portulacaceae Portulaca oleracea 5 evm.TU.LG02.2308, evm.TU.LG08.34, evm.TU.LG13.1460 ...
evm.TU.LG21.1123, evm.TU.LG23.538
Posidoniaceae Posidonia oceanica 2 gene.Posoc06g16660, gene.Posoc06g16670
Rhizophoraceae Bruguiera sexangula 1 evm.TU.Scaffold_15_RagTag.347
Rhizophoraceae Carallia pectinifolia 1 nbisL1-mrna-26619
Rhizophoraceae Ceriops tagal 2 nbisL1-mrna-7677, nbisL1-mrna-9553
Rhizophoraceae Ceriops zippeliana 2 nbisL1-mrna-17628, nbisL1-mrna-19993
Rhizophoraceae Kandelia candel 2 evm.TU.utg000001l.211, evm.TU.utg000013l.358
Rhizophoraceae Kandelia obovata 2 Maker00004377, Maker00004758
Rhizophoraceae Rhizophora apiculata 2 nbisL1-mrna-10751, nbisL1-mrna-13991
Rhizophoraceae Rhizophora mangle 2 nbisL1-mrna-14379, nbisL1-mrna-2624
Salicaceae Populus euphratica 4 populus_peu13948, populus_peu13949, populus_peu23151 ...
populus_peu26594
Solanaceae Lycium barbarum 1 gene-LOC132632319
Solanaceae Solanum chilense 1 SOLCI002413500
Solanaceae Solanum pennellii 1 gene-LOC107004536
Tamaricaceae Reaumuria soongarica 1 gene_4344
Tamaricaceae Tamarix chinensis 1 TC02G1698
Zosteraceae Zostera marina 3 Zosma01g27110.v3.1, Zosma01g27120.v3.1, Zosma05g05310.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.