Basic Information
Locus ID:
nbisL1-mrna-26563
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 15747137 | 15750233 | - | nbisL1-mrna-26563 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.32 | 70,406.69 Da | 37.62 | 88.77 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 338 | 373 | 0.0038 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 68 | 7.1E-4 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 52 | 443 | 4.08E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 333 | 7.3E-76 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 335 | 460 | 7.9E-33 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 290 | 313 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 117 | 140 | 0.021 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 398 | 422 | 51.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 192 | 215 | 230.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 400 | 423 | 7.1113 | IPR001611 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 470 | 491 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 466 | 491 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_021593830.1 | - | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2L8F0 | Receptor protein kinase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology