Basic Information
Locus ID:
nbisL1-mrna-2653
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000060F_pilon | 4433986 | 4438346 | - | nbisL1-mrna-2653 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 73,618.80 Da | 35.06 | 95.89 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 359 | 632 | 3.99109E-94 | - |
| Pfam | PF13855 | Leucine rich repeat | 181 | 222 | 1.7E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 354 | 627 | 6.4E-48 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 11 | 231 | 8.5E-22 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 333 | 629 | 6.57E-79 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 120 | 244 | 1.0E-31 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 318 | 430 | 2.7E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 431 | 649 | 9.0E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 119 | 7.2E-19 | IPR032675 |
| SMART | SM00220 | serkin_6 | 353 | 633 | 6.1E-43 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 353 | 633 | 41.445847 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 478 | 490 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 359 | 381 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_002520629.2 | receptor-like kinase TMK4 [Ricinus communis] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9WI57 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_01G056800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology