Basic Information
Locus ID:
nbisL1-mrna-2637
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 22892921 | 22894753 | + | nbisL1-mrna-2637 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.12 | 53,804.67 Da | 37.75 | 93.60 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 360 | 430 | 1.9E-18 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 23 | 342 | 1.2E-78 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 23 | 342 | 7.04E-85 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 353 | 450 | 1.4E-10 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 22 | 348 | 1.1E-113 | - |
| SMART | SM00768 | X8_cls | 359 | 444 | 6.1E-46 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 257 | 270 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66250.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_022769990.1 | glucan endo-1,3-beta-glucosidase 2-like [Durio zibethinus] | 0 |
| Q9C7U5 | Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g66250 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6P6AYY2 | glucan endo-1,3-beta-D-glucosidase OS=Durio zibethinus OX=66656 GN=LOC111313580 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology