Basic Information
Locus ID:
nbisL1-mrna-26284
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 11841811 | 11850958 | - | nbisL1-mrna-26284 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 105,067.11 Da | 43.55 | 71.46 | -0.82 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 33 | 320 | 1.15E-5 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 676 | 719 | 3.99E-7 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 666 | 727 | 3.6E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 560 | 589 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 928 | 943 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 359 | 489 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 905 | 927 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 598 | 615 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 796 | 832 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 754 | 773 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 774 | 795 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 833 | 853 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 732 | 746 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 622 | 675 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 854 | 881 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 407 | 422 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 470 | 484 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 543 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 558 | 675 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 732 | 966 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.1 | 0 | |
| RefSeq | XP_043807719.1 | titin homolog isoform X2 [Manihot esculenta] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2LRH0 | Tudor domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology