Basic Information
Locus ID:
nbisL1-mrna-2614
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 10523713 | 10529707 | - | nbisL1-mrna-2614 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.61 | 107,653.78 Da | 42.31 | 89.60 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 634 | 900 | 1.59565E-92 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 72 | 1.6E-9 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 630 | 897 | 1.8E-50 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 392 | 4.76E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 614 | 926 | 1.91E-78 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 271 | 420 | 1.6E-20 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 599 | 703 | 2.2E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 202 | 270 | 3.4E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 197 | 2.1E-42 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 704 | 916 | 1.3E-59 | - |
| SMART | SM00220 | serkin_6 | 628 | 904 | 2.1E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 628 | 901 | 39.93351 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 634 | 656 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 748 | 760 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 943 | 973 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_002531806.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X2 [Ricinus communis] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | B9T0N7 | ATP binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0126270 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology