Basic Information
Locus ID:
nbisL1-mrna-2598
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000060F_pilon | 4114105 | 4120175 | + | nbisL1-mrna-2598 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 121,352.02 Da | 51.54 | 72.48 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 807 | 1064 | 9.29206E-109 | - |
| CDD | cd06410 | PB1_UP2 | 180 | 275 | 4.8214E-43 | - |
| Pfam | PF00564 | PB1 domain | 192 | 277 | 8.9E-17 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 803 | 1064 | 9.2E-62 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 790 | 1063 | 2.08E-76 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 192 | 283 | 1.24E-19 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 794 | 888 | 1.7E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 889 | 1079 | 8.7E-53 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 195 | 278 | 2.9E-12 | - |
| SMART | SM00220 | serkin_6 | 801 | 1067 | 7.7E-59 | IPR000719 |
| SMART | SM00666 | PB1_new | 191 | 278 | 5.1E-26 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 801 | 1071 | 41.064228 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 926 | 938 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 807 | 832 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 920 | 938 | 9.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 883 | 896 | 9.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 991 | 1013 | 9.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1035 | 1057 | 9.1E-13 | IPR001245 |
| Coils | Coil | Coil | 572 | 592 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04700.1 | PB1 domain-containing protein tyrosine kinase. | 0 |
| RefSeq | XP_021648742.1 | uncharacterized protein LOC110641358 [Hevea brasiliensis] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9W961 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_03G150500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology