Basic Information
Locus ID:
nbisL1-mrna-25878
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 7943167 | 7949499 | - | nbisL1-mrna-25878 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.42 | 59,520.31 Da | 39.22 | 77.07 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 97 | 471 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 298 | 406 | 3.6E-20 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 101 | 248 | 8.7E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 83 | 445 | 1.75E-88 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 305 | 426 | 4.3E-42 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 68 | 182 | 1.0E-68 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 183 | 253 | 1.0E-68 | - |
| SMART | SM00133 | pkinase_C_6 | 407 | 472 | 2.0E-8 | IPR000961 |
| SMART | SM00220 | serkin_6 | 99 | 406 | 4.5E-103 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 99 | 406 | 46.505821 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 407 | 480 | 12.748619 | IPR000961 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 218 | 230 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 105 | 128 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33080.2 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_015572964.1 | serine/threonine-protein kinase 38-like isoform X2 [Ricinus communis] | 0 |
| Q6TGC6 | Serine/threonine-protein kinase CBK1 OS=Pneumocystis carinii OX=4754 GN=CBK1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2C9W6V1 | Serine/threonine-protein kinase tricorner-like OS=Manihot esculenta OX=3983 GN=MANES_03G050700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology