Basic Information
Locus ID:
nbisL1-mrna-25746
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 6662356 | 6673638 | - | nbisL1-mrna-25746 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.89 | 120,252.09 Da | 67.64 | 78.66 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 796 | 881 | 6.0E-18 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 900 | 1006 | 3.4E-8 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 765 | 1006 | 2.53E-46 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 875 | 1033 | 7.5E-25 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 769 | 868 | 3.3E-34 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 793 | 1071 | 12.245005 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 799 | 821 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 416 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 360 | 416 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56890.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_015571721.1 | - | 0 |
| Q8RWW0 | Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana OX=3702 GN=ALE2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2LN50 | Receptor-like serine/threonine-protein kinase ALE2 isoform X3 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology