Basic Information
Locus ID:
nbisL1-mrna-2568
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Protein kinase PVPK-1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 23534527 | 23539658 | - | nbisL1-mrna-2568 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 64,213.14 Da | 48.02 | 78.95 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05574 | STKc_phototropin_like | 195 | 543 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 420 | 523 | 5.5E-21 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 198 | 347 | 1.6E-37 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 178 | 551 | 2.16E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 418 | 541 | 2.5E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 281 | 347 | 1.7E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 195 | 280 | 1.7E-54 | - |
| SMART | SM00220 | serkin_6 | 197 | 523 | 5.9E-94 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 197 | 523 | 45.799118 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 318 | 330 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 386 | 406 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55910.1 | D6 protein kinase. D6PK is a protein kinase involved that plays a role in polar auxin transport. Most likely acts redundantly with the related proteins: D6PKL1,D6PKL2,and D6PKL3. PIN1 is a target of D6PK phosphorylation. | 0 |
| RefSeq | XP_024442641.1 | protein kinase PVPK-1 [Populus trichocarpa] | 0 |
| P15792 | Protein kinase PVPK-1 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2ITM8 | Protein kinase PVPK-1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology