Basic Information
Locus ID:
nbisL1-mrna-25406
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 2676396 | 2679461 | + | nbisL1-mrna-25406 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.35 | 63,983.56 Da | 37.37 | 82.23 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02879 | GH18_plant_chitinase_class_V | 26 | 372 | 7.82471E-126 | - |
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 31 | 366 | 3.7E-61 | IPR001223 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 437 | 477 | 1.96E-5 | IPR011009 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 28 | 370 | 1.17E-56 | IPR017853 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 271 | 337 | 3.16E-8 | IPR029070 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 44 | 367 | 2.0E-89 | - |
| Gene3D | G3DSA:3.10.50.10 | - | 269 | 337 | 2.0E-89 | IPR029070 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 429 | 488 | 1.3E-9 | - |
| SMART | SM00636 | 2g34 | 28 | 366 | 5.0E-81 | IPR011583 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 28 | 382 | 51.346092 | IPR001223 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 548 | 578 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 538 | 578 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19810.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_011017974.1 | - | 0 |
| O81862 | Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K1WZD0 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G111900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology