Basic Information
Locus ID:
nbisL1-mrna-25347
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 2080047 | 2084442 | + | nbisL1-mrna-25347 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.69 | 74,084.63 Da | 41.58 | 96.75 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 151 | 211 | 1.2E-13 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 330 | 596 | 2.0E-41 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 67 | 1.3E-12 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 298 | 2.43E-34 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 308 | 597 | 3.42E-74 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 404 | 615 | 1.4E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 297 | 403 | 9.8E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 242 | 1.4E-52 | IPR032675 |
| SMART | SM00220 | serkin_6 | 327 | 582 | 2.6E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 174 | 205 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 150 | 173 | 2.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 126 | 148 | 300.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 327 | 582 | 34.604992 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 333 | 355 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 446 | 458 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 632 | 674 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 634 | 652 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_002309372.1 | - | 0 |
| Q0WVM4 | Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana OX=3702 GN=At2g23950 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N5MF51 | Protein kinase domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_010057 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology