Basic Information
Locus ID:
nbisL1-mrna-25274
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 1367162 | 1377946 | - | nbisL1-mrna-25274 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.49 | 59,438.58 Da | 37.78 | 88.25 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 5 | 149 | 1.9E-21 | IPR001223 |
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 168 | 438 | 3.7E-46 | IPR001223 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 92 | 130 | 1.05E-5 | IPR029070 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 6 | 180 | 2.11E-22 | IPR017853 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 167 | 444 | 1.04E-49 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 410 | 440 | 4.3E-9 | - |
| Gene3D | G3DSA:3.10.50.10 | - | 91 | 144 | 1.6E-34 | IPR029070 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 3 | 90 | 1.6E-34 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 184 | 397 | 3.1E-52 | - |
| SMART | SM00636 | 2g34 | 165 | 438 | 2.7E-35 | IPR011583 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 165 | 453 | 41.898293 | IPR001223 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 1 | 153 | 17.488071 | IPR001223 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19810.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_034895477.1 | - | 0 |
| O81862 | Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J5A0L7 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology