Basic Information
Locus ID:
nbisL1-mrna-25272
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 1350632 | 1353701 | - | nbisL1-mrna-25272 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 45,596.67 Da | 46.18 | 99.75 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 29 | 191 | 2.6E-15 | IPR001223 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 29 | 224 | 1.61E-23 | IPR017853 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 225 | 380 | 2.88E-12 | IPR011009 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 23 | 227 | 7.5E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 228 | 285 | 6.4E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 287 | 369 | 2.1E-7 | - |
| SMART | SM00636 | 2g34 | 26 | 285 | 0.0011 | IPR011583 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19820.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_024445955.1 | putative cysteine-rich receptor-like protein kinase 20 [Populus trichocarpa] | 0 |
| Q9LW83 | G-type lectin S-receptor-like serine/threonine-protein kinase CES101 OS=Arabidopsis thaliana OX=3702 GN=CES101 PE=2 SV=2 | 0 | |
| TrEMBL | A0A835MMG3 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology