Basic Information
Locus ID:
nbisL1-mrna-25168
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002503F_pilon | 4028 | 5592 | - | nbisL1-mrna-25168 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.96 | 38,463.96 Da | 52.69 | 87.38 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 293 | 341 | 8.04E-6 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 293 | 343 | 2.5E-8 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65790.2 | - | 0 |
| RefSeq | XP_011007437.1 | PREDICTED: probable serine/threonine-protein kinase At1g18390 [Populus euphratica] | 0 |
| TrEMBL | A0A2P2MPK7 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq09G2033 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_17_RagTag.879 |
| Rhizophoraceae | Carallia pectinifolia | 4 | nbisL1-mrna-23601, nbisL1-mrna-23846, nbisL1-mrna-3477 ... |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000001l.31 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00004632 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-25168 |