Basic Information
Locus ID:
nbisL1-mrna-25108
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 29619827 | 29624801 | - | nbisL1-mrna-25108 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.98 | 73,363.91 Da | 29.27 | 86.05 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 126 | 186 | 7.5E-15 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 353 | 619 | 2.3E-31 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 74 | 6.7E-6 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 354 | 624 | 4.41E-50 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 218 | 5.67E-32 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 317 | 425 | 1.0E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 147 | 238 | 3.1E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 146 | 7.9E-24 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 426 | 643 | 2.2E-38 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 350 | 624 | 26.901962 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 313 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011002964.1 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g31250 [Populus euphratica] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2WLR7 | Protein kinase domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_028990 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology