Basic Information
Locus ID:
nbisL1-mrna-25023
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 28562066 | 28567813 | - | nbisL1-mrna-25023 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 67,026.59 Da | 56.45 | 78.56 | -0.50 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_017972616.1 | PREDICTED: F-box protein At2g26160 [Theobroma cacao] | 0 |
| TrEMBL | A0A061G441 | DUF295 domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_015688 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_9_RagTag.1491 |
| Rhizophoraceae | Carallia pectinifolia | 6 | nbisL1-mrna-20646, nbisL1-mrna-20648, nbisL1-mrna-20649 ... |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-21479 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000003l.941 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00009936 |
| Rhizophoraceae | Rhizophora mangle | 3 | nbisL1-mrna-12041, nbisL1-mrna-4590, nbisL1-mrna-4591 |