halophFGD

Basic Information

Locus ID: nbisL1-mrna-2502

Species & Taxonomic ID: Carallia pectinifolia & 98586

Genome Assembly: GCA_037832335.1

Description: Protein of unknown function (DUF295)

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr01	23134516	23135517	-	nbisL1-mrna-2502

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.66	29,950.39 Da	42.81	77.04	-0.37

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF03478	Protein of unknown function (DUF295)	193	238	1.1E-6	IPR005174
Pfam	PF00646	F-box domain	50	81	3.9E-4	IPR001810
SUPERFAMILY	SSF81383	F-box domain	50	85	1.83E-7	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	50	91	2.7E-8	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Rhizophoraceae	Bruguiera sexangula	1	evm.TU.Scaffold_3_RagTag.2018
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-2474, nbisL1-mrna-2502
Rhizophoraceae	Rhizophora apiculata	1	nbisL1-mrna-21524