Basic Information
Locus ID:
nbisL1-mrna-24874
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 27108525 | 27117292 | - | nbisL1-mrna-24874 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 97,597.24 Da | 36.47 | 96.24 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 723 | 825 | 3.6E-10 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 160 | 220 | 2.6E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 42 | 78 | 2.7E-8 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 634 | 719 | 4.8E-16 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 617 | 856 | 3.51E-51 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 53 | 398 | 3.74E-53 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 706 | 842 | 1.4E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 194 | 298 | 8.2E-28 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 601 | 705 | 5.6E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 193 | 9.6E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 299 | 389 | 7.6E-13 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 207 | 231 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 325 | 349 | 6.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 135 | 159 | 240.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 631 | 885 | 13.502931 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 637 | 659 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 850 | 865 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 841 | 865 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021678206.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X2 [Hevea brasiliensis] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2M563 | Putative LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology