Basic Information
Locus ID:
nbisL1-mrna-24801
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002483F_pilon | 4369 | 13305 | - | nbisL1-mrna-24801 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 159,552.70 Da | 46.09 | 102.29 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 1173 | 1394 | 1.1E-8 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 585 | 6.12E-16 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 464 | 775 | 3.53E-21 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 851 | 1217 | 4.42E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 95 | 3.9E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 96 | 315 | 2.1E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 645 | 830 | 1.4E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1233 | 1396 | 1.6E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 993 | 1232 | 8.8E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 831 | 986 | 2.9E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 328 | 587 | 2.4E-11 | IPR032675 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_043808118.1 | uncharacterized protein LOC110607877 [Manihot esculenta] | 0 |
| TrEMBL | A0A2P2MMH8 | Putative disease resistance protein At4g27220 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology