Basic Information
Locus ID:
nbisL1-mrna-24736
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 26001045 | 26005865 | - | nbisL1-mrna-24736 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.60 | 87,710.97 Da | 44.08 | 90.37 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00041 | CUB | 322 | 415 | 3.07763E-7 | IPR000859 |
| Pfam | PF00069 | Protein kinase domain | 527 | 674 | 8.9E-20 | IPR000719 |
| Pfam | PF04674 | Phosphate-induced protein 1 conserved region | 29 | 288 | 1.5E-15 | IPR006766 |
| Pfam | PF00431 | CUB domain | 321 | 413 | 2.2E-4 | IPR000859 |
| SUPERFAMILY | SSF49854 | Spermadhesin, CUB domain | 435 | 479 | 2.88E-5 | IPR035914 |
| SUPERFAMILY | SSF49854 | Spermadhesin, CUB domain | 319 | 415 | 2.88E-10 | IPR035914 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 517 | 704 | 9.25E-41 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 506 | 732 | 6.1E-36 | - |
| Gene3D | G3DSA:2.60.120.290 | Spermadhesin, CUB domain | 312 | 416 | 1.4E-9 | IPR035914 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 523 | 793 | 21.191826 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16130.1 | wall associated kinase-like 2. wall-associated kinase like | 0 |
| RefSeq | XP_021592047.1 | uncharacterized protein LOC110599756 isoform X1 [Manihot esculenta] | 0 |
| Q7X8C5 | Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana OX=3702 GN=WAKL2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2C9WMA1 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30051130 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_12_RagTag.63, evm.TU.Scaffold_12_RagTag.64 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-24736 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000027l.250 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-18901 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-11605 |