Basic Information
Locus ID:
nbisL1-mrna-24701
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 25595392 | 25599708 | - | nbisL1-mrna-24701 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 76,104.23 Da | 52.99 | 89.97 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 89 | 147 | 7.1E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 435 | 665 | 3.5E-21 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 435 | 674 | 1.33E-37 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 52 | 212 | 2.14E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 185 | 7.9E-27 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 429 | 487 | 9.2E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 488 | 674 | 6.8E-32 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 386 | 669 | 16.866821 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 233 | 257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 233 | 256 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 286 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G56050.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_011003691.1 | PREDICTED: probable inactive receptor-like protein kinase At3g56050 [Populus euphratica] | 0 |
| Q9LYN6 | Probable inactive receptor-like protein kinase At3g56050 OS=Arabidopsis thaliana OX=3702 GN=At3g56050 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2JRX1 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology