Basic Information
Locus ID:
nbisL1-mrna-24613
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Transducin WD40 repeat-like superfamily protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001413F_pilon | 73140 | 74575 | - | nbisL1-mrna-24613 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.66 | 11,191.47 Da | 41.72 | 87.09 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 67 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38630.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_021620670.1 | - | 0 |
| TrEMBL | A0A2P2M0P5 | Uncharacterized protein MANES_08G167000 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-3924 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-24613 |