Basic Information
Locus ID:
nbisL1-mrna-24574
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002271F_pilon | 59795 | 61799 | - | nbisL1-mrna-24574 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 23,637.72 Da | 30.47 | 99.29 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 49 | 130 | 5.7E-17 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 23 | 137 | 2.81E-26 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 32 | 122 | 8.5E-30 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 46 | 210 | 12.245005 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 52 | 75 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60900.1 | receptor-like protein kinase 1. Encodes a receptor-like protein kinase. | 0 |
| RefSeq | XP_021692362.1 | G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 [Hevea brasiliensis] | 0 |
| Q39202 | G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana OX=3702 GN=RLK1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J5AMN1 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg16728, jg29538 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000009421, gene:ENSEOMG00000042156 |
| Amaranthaceae | Chenopodium quinoa | 16 | CQ.Regalona.r1.2AG0008970, CQ.Regalona.r1.2AG0009740 ... |
| Arecaceae | Cocos nucifera | 1 | COCNU_06G011020 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G2329 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G2495 |
| Poaceae | Oryza coarctata | 1 | Oco11G007370 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG20.18 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-12421, nbisL1-mrna-17488 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00018876 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-24574 |
| Salicaceae | Populus euphratica | 1 | populus_peu25094 |