Basic Information
Locus ID:
nbisL1-mrna-24571
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 24670891 | 24672889 | + | nbisL1-mrna-24571 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.67 | 36,790.66 Da | 52.33 | 81.68 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 39 | 187 | 1.3E-69 | IPR004854 |
| Gene3D | G3DSA:3.10.330.10 | - | 112 | 185 | 6.4E-35 | - |
| Gene3D | G3DSA:2.40.40.50 | - | 36 | 110 | 1.1E-30 | IPR042299 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 299 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 317 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G29070.2 | Ubiquitin fusion degradation UFD1 family protein. | 0 |
| RefSeq | XP_021642543.1 | ubiquitin fusion degradation protein 1 homolog [Hevea brasiliensis] | 0 |
| Q55BK0 | Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1 | 0 | |
| TrEMBL | B9T677 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology