Basic Information
Locus ID:
nbisL1-mrna-2454
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001711F_pilon | 6039148 | 6039586 | - | nbisL1-mrna-2454 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.07 | 11,307.62 Da | 60.87 | 79.81 | -0.17 |
Protein Domain:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17760.1 | Eukaryotic aspartyl protease family protein. | 0 |
| RefSeq | XP_021600542.1 | - | 0 |
| Q8VYV9 | Aspartyl protease family protein 1 OS=Arabidopsis thaliana OX=3702 GN=APF1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2LFZ7 | Peptidase A1 domain-containing protein OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 18 | Sgl04409, Sgl04410, Sgl04816, Sgl09479, Sgl09480, Sgl21236 ... |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000027573 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.6BG0024640 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0602718 |
| Poaceae | Zea mays | 2 | Zm00001eb026340_P001, Zm00001eb305040_P001 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-2454 |